Optional R dependency

DESeq2 is required for rpy2-mediated normalization kmerdb matrix Normalized *.kdb

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DESeq2")

Install

Install the latest version from PyPI

pip install kmerdb

Install locally for development

git clone git@github.com:MatthewRalston/kmerdb.git
cd kdb
# I know the following may be prone to fail, but I need to know if this is an issue, I always install from setup.py.
pip install --no-cache-dir . # python setup.py install